Package index • nrp

All functions
`basinArm`	A Basin-Arm table for Sea-bird CTD data
`ctdSites`	A site table for Sea-bird CTD data
`emsSites`	A site table for EMS data
`ems_metals_init`	An initialized table for EMS metals data
`ems_param_lookup`	A lookup table for for selecting the desired columns from EMS
`ems_standard_init`	An initialized table for EMS standard data
`initialize_ctd()`	Initialize tables for database
`lakes`	A lakes table for Sea-bird CTD data
`mysid_input_cols`	A named character vector with the correct column names, data types, and order for raw mysid data
`mysid_params`	A character vector of all parameters for the mysid data in the database
`nrp_add_phyto_species()`	Add new phytoplankton species to the 'PhytoplanktonSpecies' table in the database
`nrp_add_sites()`	Add new sites to the 'Sites' table in the database.
`nrp_create_db()`	Create NRP SQLite Database
`nrp_download_ctd()`	Download CTD data table from database
`nrp_download_ctd_basin_arm()`	Download BasinArm table
`nrp_download_ctd_visit()`	Download CTD visit table
`nrp_download_ems()`	Dowload EMS data table from database
`nrp_download_lakes()`	Download Lake table
`nrp_download_mysid()`	Download Mysid data table from database
`nrp_download_mysid_sample()`	Download Mysid sample table
`nrp_download_phyto()`	Download Phytoplankton data table from database
`nrp_download_phyto_species()`	Download phytoplankton species table
`nrp_download_sites()`	Download CTD site table
`nrp_download_zoo_sample()`	Download Zooplankton sample table
`nrp_download_zooplankton()`	Download Zooplankton data table from database
`nrp_extract_ems()`	Extract and clean EMS data
`nrp_read_ctd()`	Read CTD Files
`nrp_read_ctd_file()`	Read CTD File
`nrp_read_mysid()`	Read mysid raw data files
`nrp_read_mysid_file()`	Read mysid raw data file
`nrp_read_phyto()`	Read phytoplankton raw data files
`nrp_read_phyto_file()`	Read phytoplankton raw data file
`nrp_read_zooplankton()`	Read zooplankton raw data files
`nrp_read_zooplankton_file()`	Read zooplankton raw data file
`nrp_upload_ctd()`	Upload CTD data to nrp database
`nrp_upload_ems_metals()`	Upload EMS metals data to nrp database
`nrp_upload_ems_standard()`	Upload standard EMS data to nrp database
`nrp_upload_mysid()`	Upload mysid data to the nrp database
`nrp_upload_phyto()`	Upload phyto data to the nrp database
`nrp_upload_zooplankton()`	Upload zooplankton data to the nrp database
`phyto_input_cols`	A named character vector with the correct column names, data types, and order for raw phytoplankton data
`phyto_species`	A reference table for phytoplankton species
`site_date_lookup`	A lookup table for matching historical file names with Site IDs and Dates
`zoo_input_cols`	A named character vector with the correct column names, data types, and order for raw zooplankton data
`zoo_params`	A character vector of all parameters for the zooplankton data in the database

Reference

All functions