Package index
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augment(<bboufit>)
- Get Augmented Data from bboufit Object
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augment(<bboufit_ml>)
- Get Augmented Data from bboufit_ml Object
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bb_fit_recruitment()
- Fit Recruitment Model
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bb_fit_recruitment_ml()
- Fit Recruitment Model with Maximum Likelihood
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bb_fit_survival()
- Fit Survival Model
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bb_fit_survival_ml()
- Fit Survival Model with Maximum Likelihood
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bb_plot_month()
- Plot Month
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bb_plot_month_survival()
- Plot Monthly Survival
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bb_plot_year()
- Plot Year
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bb_plot_year_growth()
- Plot Year Population Growth
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bb_plot_year_population_change()
- Plot Year Population Change
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bb_plot_year_recruitment()
- Plot Year Recruitment
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bb_plot_year_survival()
- Plot Year Survival
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bb_plot_year_trend_recruitment()
- Plot Annual Recruitment Trend
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bb_plot_year_trend_survival()
- Plot Annual Survival Trend
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bb_predict_calf_cow_ratio()
- Predict Calf-Cow Ratio
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bb_predict_growth()
bb_predict_lambda()
- Predict Population Growth Lambda
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bb_predict_population_change()
- Predict Population Change
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bb_predict_recruitment()
- Predict Recruitment
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bb_predict_recruitment_trend()
- Predict Recruitment Trend
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bb_predict_survival()
- Predict Survival
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bb_predict_survival_trend()
- Predict Survival Trend
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bb_priors_recruitment()
- Recruitment model default priors
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bb_priors_survival()
- Survival model default priors
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coef(<bboufit>)
- Get Tidy Tibble from bboufit Object.
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coef(<bboufit_ml>)
- Get Tidy Tibble from bboufit_ml Object.
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converged(<bboufit>)
- Get Convergence of bboufit Object
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converged(<bboufit_ml>)
- Get Convergence of bboufit_ml Object
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esr(<bboufit>)
- Get Effective Sample Rate of bboufit Object
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estimates(<bboufit>)
- Estimates for bboufit Object
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estimates(<bboufit_ml>)
- Estimates for bboufit_ml Object
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glance(<bboufit>)
- Get a Glance Summary of bboufit Object
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glance(<bboufit_ml>)
- Get a Glance Summary of bboufit_ml Object
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model_code()
- Get Model Code
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model_recruitment()
- Build Nimble recruitment model.
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model_survival()
- Build Nimble survival model.
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nchains(<bboufit>)
- Get Number of Chains from bboufit Object
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niters(<bboufit>)
- Get Number of Iterations from bboufit Object
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npars(<bboufit>)
- Get Number of Parameters from bboufit Object
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npars(<bboufit_ml>)
- Get Number of Parameters from bboufit_ml Object
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nterms(<bboufit>)
- Get Number of Terms from bboufit Object
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nterms(<bboufit_ml>)
- Get Number of Terms from bboufit_ml Object
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pars(<bboufit>)
- Get Parameters from bboufit Object
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pars(<bboufit_ml>)
- Get Parameters from bboufit_ml Object
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predict(<bboufit_recruitment>)
- Predict Recruitment
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predict(<bboufit_survival>)
- Predict Survival
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rhat(<bboufit>)
- Get Rhat of bboufit Object
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samples()
- Get MCMC samples
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tidy(<bboufit>)
- Get Tidy Tibble from bboufit Object.
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tidy(<bboufit_ml>)
- Get Tidy Tibble from bboufit_ml Object.